| Tools : Bakta | |
|---|---|
| Public ID | bakta |
| Short Name | Bakta |
| Version | 1.2.0 |
| Description | Annotate the genome sequence with Bakta. |
| Software | Bakta v1.12.0 (DB: v6.0 - Light) |
| Citation | Schwengers O, Jelonek L, Dieckmann MA, Beyvers S, Blom J, Goesmann A. Bakta: rapid and standardized annotation of bacterial genomes via alignment-free sequence identification. Microb Genom. 2021 Nov;7(11):000685. |
| Category | Genome Annotation |
| Added By | Jason R. Grant |
| Worker | server |
| Queue | medium |
| Created At | 2026-06-15 15:53:40 UTC |
| Updated At | 2026-06-15 15:53:40 UTC |
Change Log
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Prokan Tool Changelog: Bakta
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Unreleased - 2026-06-13
- Add optional Conda backend when the docker attribute is absent from tool.yaml.
- Pin the Bakta Conda backend to Bakta 1.12.0 and DIAMOND 2.2.1.
v1.2.0 - 2026-06-12
- Update Bakta to v1.12.0 (from v1.8.2)
- Update Bakta DB to v6.0 (from v5.0)
- Convert Bakta feature types to standard GenBank feature keys where possible.
- Preserve original Bakta feature types as metadata when they differ from the GenBank feature key
- Name oriC, oriV, oriT, and CRISPR features from their original Bakta type.
- Add GenBank-style qualifiers from Bakta JSON output.
- Add qualifier include/exclude controls for Bakta-added qualifiers.
- Add selected Bakta metadata fields with include/exclude controls.
- Update the Bakta legend input to support grouping by GenBank type or original Bakta type.
- Fix to remove matplotlib warning
- To save space, stub input cgview.fa and output bakta.embl, bakta.fna
v1.1.0 - 2024-10-08
- Improve features names (Gene -> Product -> Type)
v1.0.0 - 2023-11-14
- Initial Release